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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs2460921 chr8:12872968 C/T 0 490 16.07 14.47 13.33 KM Plot
THCA rs2466246 chr8:12873035 T/C 0 490 16.07 14.47 13.33 KM Plot
THCA rs2466247 chr8:12873414 A/G 6.86E-13 490 13.83 14.9 16.02 KM Plot
THCA rs2466251 chr8:12875104 T/A 0 487 16.2 14.68 13.33 KM Plot
THCA rs2466430 chr8:95872763 T/C 6.2E-6 474 7.67 16.37 15.97 KM Plot
THCA rs2473305 chr1:22351976 C/T 3.29E-5 470 14.7 17.7 12.4 KM Plot
THCA rs2473316 chr1:22411019 T/G 0.000163 485 12.7 18.47 14.9 KM Plot
THCA rs2474883 chr6:88681370 A/G 5.59E-7 490 33.97 19.27 15.2 KM Plot
THCA rs2475735 chr10:81628355 C/G 5.37E-5 467 15.9 17.63 6.03 KM Plot
THCA rs2484687 chr1:16327828 A/T 1.14E-11 489 15.17 18.63 12.63 KM Plot
THCA rs2490304 chr10:7900005 G/A 8.63E-6 479 15.57 16.2 15.5 KM Plot
THCA rs2508201 chr11:71995639 A/G 5.07E-6 490 13.83 14.23 16.27 KM Plot
THCA rs2510035 chr11:77953175 A/C 2.4E-5 487 16.4 15.3 12.47 KM Plot
THCA rs2510039 chr11:77944480 G/A 6.66E-5 486 16.52 15.67 12.47 KM Plot
THCA rs2510040 chr11:77944548 T/A 6.58E-5 485 16.52 15.48 12.47 KM Plot